halophFGD

Basic Information

Locus ID: AH04.2051

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Acyltransferase C-terminus

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH04	40769901	40778840	-	AH04.2051

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.67	140,350.38 Da	36.96	94.78	0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd07990	LPLAT_LCLAT1-like	58	251	2.40272E-80	-
Pfam	PF13041	PPR repeat family	675	724	1.1E-17	IPR002885
Pfam	PF13041	PPR repeat family	1025	1072	1.2E-14	IPR002885
Pfam	PF13041	PPR repeat family	780	828	1.4E-14	IPR002885
Pfam	PF13041	PPR repeat family	1096	1141	7.9E-9	IPR002885
Pfam	PF12854	PPR repeat	951	981	2.6E-7	IPR002885
Pfam	PF01535	PPR repeat	1168	1198	0.0015	IPR002885
Pfam	PF13041	PPR repeat family	603	651	7.9E-9	IPR002885
Pfam	PF13041	PPR repeat family	850	899	5.7E-15	IPR002885
Pfam	PF01535	PPR repeat	994	1020	7.5E-4	IPR002885
Pfam	PF01553	Acyltransferase	72	226	5.9E-15	IPR002123
Pfam	PF16076	Acyltransferase C-terminus	239	311	8.2E-21	IPR032098
Pfam	PF01535	PPR repeat	749	778	2.0E-5	IPR002885
Pfam	PF01535	PPR repeat	571	597	0.016	IPR002885
SUPERFAMILY	SSF48452	TPR-like	675	1056	6.83E-5	IPR011990
SUPERFAMILY	SSF69593	Glycerol-3-phosphate (1)-acyltransferase	16	182	1.06E-12	-
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	473	627	5.0E-13	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	834	969	2.0E-38	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	628	728	2.3E-27	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1081	1259	1.1E-32	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	970	1080	1.1E-33	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	729	833	6.5E-32	IPR011990
SMART	SM00563	plsc_2	86	208	2.7E-25	IPR002123
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1063	1097	3.9E-8	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	678	711	9.8E-11	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	924	957	0.0013	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	749	782	2.1E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	888	921	4.7E-8	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	818	851	8.9E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	570	599	9.2E-5	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	960	990	2.0E-4	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	713	747	1.5E-5	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1098	1131	5.5E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1168	1202	7.1E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	994	1027	8.2E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1133	1167	6.2E-4	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	854	887	1.1E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	783	817	2.9E-10	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1028	1061	6.2E-12	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	605	640	8.2E-8	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	956	990	10.435215	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1061	1095	10.402331	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	991	1025	10.39137	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1096	1130	9.97484	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	886	920	13.318037	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	816	850	10.511944	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	676	710	13.67976	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1131	1165	9.591195	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1166	1200	11.202506	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	603	638	11.586152	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	568	602	9.185627	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	851	885	13.438611	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	781	815	13.635915	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	921	955	9.821383	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1026	1060	15.093767	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	711	745	11.816339	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	746	780	12.232868	IPR002885

Gene Ontology

Molecular Function:

GO:0005515 (protein binding) GO:0016746 (acyltransferase activity)

KEGG Pathway

KO Term:

K13523 (lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase [EC:2.3.1.51 2.3.1.-])

Pathway:

ko00561 (Glycerolipid metabolism) map00561 (Glycerolipid metabolism) ko00564 (Glycerophospholipid metabolism) map00564 (Glycerophospholipid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko04072 (Phospholipase D signaling pathway) map04072 (Phospholipase D signaling pathway)

Module:

M00089 (Triacylglycerol biosynthesis)

Reaction:

R02241 (Phosphatidate + CoA <=> 1-Acyl-sn-glycerol 3-phosphate + Acyl-CoA) R09034 (Acyl-CoA + 1-Acylglycerophosphoinositol <=> CoA + 1-Phosphatidyl-D-myo-inositol) R09381 (Acyl-[acyl-carrier protein] + 1-Acyl-sn-glycerol 3-phosphate <=> Acyl-carrier protein + Phosphatidate)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G57650.1	lysophosphatidyl acyltransferase 2. Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.	6.01E-172
RefSeq	XP_004979811.1	1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 [Setaria italica]	2.84E-252
Swiss-Prot	Q41745	1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays OX=4577 GN=PLS1 PE=2 SV=1	1.68E-250
TrEMBL	K3ZIW2	1-acylglycerol-3-phosphate O-acyltransferase OS=Setaria italica OX=4555 GN=101764153 PE=3 SV=1	6.42E-251

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.4AG0007790
Arecaceae	Cocos nucifera	1	scaffold010752G000010
Asparagaceae	Asparagus officinalis	1	AsparagusV1_09.1150.V1.1
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g00170, gene.Cymno02g02240, gene.Cymno03g06300 ... gene.Cymno15g00330
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate02g06920, gene.Thate08g09850, gene.Thate08g14280 ... gene.Thate08g21140, gene.Thate09g04990
Poaceae	Echinochloa crus-galli	20	AH01.1459, AH01.1700, AH04.2051, AH06.2011, BH01.1832 ... BH01.1871, BH01.1904, BH01.1913, BH01.1959, BH04.2089, CH01.1979, CH01.1980, CH01.2004, CH01.2019, CH01.2133, CH01.2164, CH03.2508, CH04.2418, CH04.280, Contig3341.1
Poaceae	Eleusine coracana subsp. coracana	20	gene-QOZ80_2AG0112480, gene-QOZ80_2AG0112540 ... gene-QOZ80_2AG0112570, gene-QOZ80_2AG0112590, gene-QOZ80_2AG0113350, gene-QOZ80_2AG0113380, gene-QOZ80_2BG0165660, gene-QOZ80_2BG0165840, gene-QOZ80_2BG0165960, gene-QOZ80_2BG0165970, gene-QOZ80_2BG0166300, gene-QOZ80_2BG0166610, gene-QOZ80_2BG0171980, gene-QOZ80_4AG0321840, gene-QOZ80_4AG0321850, gene-QOZ80_4BG0357420, gene-QOZ80_5AG0366520, gene-QOZ80_5BG0414280, gene-QOZ80_7BG0607290, gene-QOZ80_9BG0713290
Poaceae	Hordeum vulgare	21	HORVU.MOREX.r3.1HG0005110.1.CDS1 ... HORVU.MOREX.r3.1HG0011250.1.CDS1, HORVU.MOREX.r3.1HG0011400.1.CDS1, HORVU.MOREX.r3.1HG0011450.1.CDS1, HORVU.MOREX.r3.1HG0011510.1.CDS1, HORVU.MOREX.r3.1HG0011560.1.CDS1, HORVU.MOREX.r3.1HG0011590.1.CDS1, HORVU.MOREX.r3.1HG0011680.1.CDS1, HORVU.MOREX.r3.1HG0011730.1.CDS1, HORVU.MOREX.r3.1HG0011760.1.CDS1, HORVU.MOREX.r3.1HG0011790.1.CDS1, HORVU.MOREX.r3.1HG0014490.1.CDS1, HORVU.MOREX.r3.1HG0014640.1.CDS1, HORVU.MOREX.r3.1HG0014650.1.CDS1, HORVU.MOREX.r3.1HG0014660.1.CDS1, HORVU.MOREX.r3.1HG0016620.1.CDS1, HORVU.MOREX.r3.6HG0541240.1, HORVU.MOREX.r3.6HG0551520.1.CDS1, HORVU.MOREX.r3.6HG0555030.1.CDS1, HORVU.MOREX.r3.6HG0555060.1.CDS1, HORVU.MOREX.r3.6HG0616090.1.CDS1
Poaceae	Lolium multiflorum	45	gene-QYE76_007092, gene-QYE76_007147, gene-QYE76_007305 ... gene-QYE76_007310, gene-QYE76_007810, gene-QYE76_008963, gene-QYE76_008968, gene-QYE76_008973, gene-QYE76_008975, gene-QYE76_008976, gene-QYE76_008987, gene-QYE76_009002, gene-QYE76_009034, gene-QYE76_009092, gene-QYE76_009093, gene-QYE76_009095, gene-QYE76_009097, gene-QYE76_009104, gene-QYE76_009109, gene-QYE76_009113, gene-QYE76_009326, gene-QYE76_009336, gene-QYE76_009348, gene-QYE76_009351, gene-QYE76_014117, gene-QYE76_016763, gene-QYE76_016764, gene-QYE76_016765, gene-QYE76_017955, gene-QYE76_020091, gene-QYE76_020092, gene-QYE76_020093, gene-QYE76_020094, gene-QYE76_020095, gene-QYE76_020096, gene-QYE76_020102, gene-QYE76_020114, gene-QYE76_020337, gene-QYE76_025544, gene-QYE76_043413, gene-QYE76_053818, gene-QYE76_057962, gene-QYE76_061904, gene-QYE76_063993, gene-QYE76_063995
Poaceae	Oryza coarctata	12	Oco01G006140, Oco02G006190, Oco04G003180, Oco07G003250 ... Oco07G003300, Oco08G003580, Oco16G000440, Oco19G007000, Oco19G007200, Oco19G007340, Oco20G007160, Oco20G007250
Poaceae	Oryza sativa	14	LOC_Os04g28234.2, LOC_Os04g28300.1, LOC_Os08g01640.1 ... LOC_Os08g01650.1, LOC_Os08g01870.1, LOC_Os08g15000.1, LOC_Os10g35090.1, LOC_Os10g35230.1, LOC_Os10g35240.1, LOC_Os10g35260.1, LOC_Os10g35436.1, LOC_Os10g35440.1, LOC_Os10g35640.1, LOC_Os10g35650.1
Poaceae	Paspalum vaginatum	17	gene-BS78_01G189400, gene-BS78_05G011700 ... gene-BS78_05G029200, gene-BS78_05G034100, gene-BS78_05G034200, gene-BS78_05G037400, gene-BS78_05G045700, gene-BS78_05G045800, gene-BS78_05G046300, gene-BS78_05G046500, gene-BS78_05G046600, gene-BS78_05G046900, gene-BS78_05G047400, gene-BS78_05G184700, gene-BS78_05G185100, gene-BS78_05G185600, gene-BS78_06G061400
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0500284, Pt_Chr0500285
Poaceae	Sporobolus alterniflorus	22	Chr06G030060, Chr09G000530, Chr09G000870, Chr09G001200 ... Chr09G001810, Chr0G029500, Chr13G022300, Chr18G000360, Chr22G014480, Chr23G016880, Chr24G001020, Chr24G001150, Chr24G001180, Chr24G015790, Chr25G013150, Chr25G013160, Chr25G013190, Chr25G013350, Chr28G001210, Chr30G012910, Chr30G012960, Chr30G013230
Poaceae	Thinopyrum elongatum	20	Tel1E01G069500, Tel1E01G115200, Tel1E01G115500 ... Tel1E01G115600, Tel1E01G116200, Tel1E01G118600, Tel1E01G119100, Tel1E01G119500, Tel1E01G136600, Tel1E01G136800, Tel1E01G138200, Tel1E01G138700, Tel1E01G139300, Tel1E01G139400, Tel1E01G139700, Tel1E01G152600, Tel2E01G903700, Tel2E01G904000, Tel6E01G188300, Tel6E01G556900
Poaceae	Triticum dicoccoides	49	gene_TRIDC1AG003330, gene_TRIDC1AG003340 ... gene_TRIDC1AG007580, gene_TRIDC1AG007610, gene_TRIDC1AG007780, gene_TRIDC1AG009300, gene_TRIDC1AG010140, gene_TRIDC1AG010250, gene_TRIDC1AG010270, gene_TRIDC1BG004200, gene_TRIDC1BG004230, gene_TRIDC1BG009450, gene_TRIDC1BG009460, gene_TRIDC1BG009470, gene_TRIDC1BG009590, gene_TRIDC1BG009630, gene_TRIDC1BG009650, gene_TRIDC1BG009670, gene_TRIDC1BG009890, gene_TRIDC1BG011380, gene_TRIDC1BG011500, gene_TRIDC1BG011510, gene_TRIDC1BG013060, gene_TRIDC1BG051260, gene_TRIDC2AG073710, gene_TRIDC2AG074240, gene_TRIDC2AG074270, gene_TRIDC2AG074350, gene_TRIDC2BG016010, gene_TRIDC2BG080930, gene_TRIDC2BG080970, gene_TRIDC2BG081010, gene_TRIDC5BG041750, gene_TRIDC6AG001570, gene_TRIDC6AG001580, gene_TRIDC6AG010130, gene_TRIDC6AG012860, gene_TRIDC6AG012880, gene_TRIDC6AG012890, gene_TRIDC6AG013070, gene_TRIDC6AG046880, gene_TRIDC6BG002190, gene_TRIDC6BG002200, gene_TRIDC6BG002210, gene_TRIDC6BG005590, gene_TRIDC6BG017940, gene_TRIDC6BG018300, gene_TRIDC6BG018310, gene_TRIDC6BG054690
Poaceae	Triticum aestivum	126	TraesCS1A02G031600.1.cds1, TraesCS1A02G031700.1.cds1 ... TraesCS1A02G054500.1, TraesCS1A02G054700.1.cds1, TraesCS1A02G054800.1.cds1, TraesCS1A02G055500.1.cds1, TraesCS1A02G055800.1, TraesCS1A02G056000.1.cds1, TraesCS1A02G056105.1, TraesCS1A02G057300.1, TraesCS1A02G057400.1, TraesCS1A02G066600.1.cds1, TraesCS1A02G067400.1.cds1, TraesCS1A02G067600.1.cds1, TraesCS1A02G067700.1.cds1, TraesCS1A02G072982.1.cds1, TraesCS1A02G073600.1.cds1, TraesCS1A02G073800.1.cds1, TraesCS1B02G038200.1.cds1, TraesCS1B02G038300.1.cds1, TraesCS1B02G038400.1.cds1, TraesCS1B02G038500.1.cds1, TraesCS1B02G039100.1.cds1, TraesCS1B02G039200.1.cds1, TraesCS1B02G039620.1, TraesCS1B02G039700.1.cds1, TraesCS1B02G071600.1, TraesCS1B02G071617.1.cds1, TraesCS1B02G071642.1, TraesCS1B02G072300.1.cds1, TraesCS1B02G072400.1.cds1, TraesCS1B02G072700.1.cds1, TraesCS1B02G072900.1.cds1, TraesCS1B02G074600.1.cds1, TraesCS1B02G075000.1.cds1, TraesCS1B02G084563.1.cds1, TraesCS1B02G085900.1.cds1, TraesCS1B02G086000.1, TraesCS1B02G092500.1.cds1, TraesCS1B02G092600.1.cds1, TraesCS1B02G315437.1.cds1, TraesCS1B02G315500.1.cds1, TraesCS1D02G032300.1.cds1, TraesCS1D02G033000.1.cds1, TraesCS1D02G033100.1.cds1, TraesCS1D02G033205.1.cds1, TraesCS1D02G055300.1.cds1, TraesCS1D02G055500.1, TraesCS1D02G056200.1.cds1, TraesCS1D02G056400.1.cds1, TraesCS1D02G056600.1, TraesCS1D02G057800.1.cds1, TraesCS1D02G058000.1.cds1, TraesCS1D02G058200.1.cds1, TraesCS1D02G058517.1.cds1, TraesCS1D02G067980.1, TraesCS1D02G068400.1.cds1, TraesCS1D02G068500.1.cds1, TraesCS1D02G068600.1.cds1, TraesCS1D02G068800.1.cds1, TraesCS1D02G068900.1.cds1, TraesCS1D02G069100.1, TraesCS1D02G075800.1.cds1, TraesCS1D02G076500.1.cds1, TraesCS1D02G076800.1.cds1, TraesCS1D02G076900.1, TraesCS1D02G095200.1, TraesCS2A02G478045.1.cds1, TraesCS2A02G526200.1.cds1, TraesCS2A02G530300.1, TraesCS2A02G530600.1.cds1, TraesCS2A02G530700.1.cds1, TraesCS2B02G126905.1.cds1, TraesCS2B02G560000.1.cds1, TraesCS2B02G560700.1.cds1, TraesCS2B02G560741.1.cds1, TraesCS2D02G477278.1.cds1, TraesCS2D02G532100.1.cds1, TraesCS2D02G532182.1.cds1, TraesCS2D02G532300.1.cds1, TraesCS2D02G532600.1.cds1, TraesCS5B02G250800.1.cds1, TraesCS6A02G014500.1.cds1, TraesCS6A02G014800.1.cds1, TraesCS6A02G015000.1.cds1, TraesCS6A02G015958.1.cds1, TraesCS6A02G099300.1.cds1, TraesCS6A02G099318.1.cds1, TraesCS6A02G099389.1.cds1, TraesCS6A02G099407.1, TraesCS6A02G101100.1.cds1, TraesCS6A02G311600.1.cds1, TraesCS6B02G021200.1.cds1, TraesCS6B02G021500.1.cds1, TraesCS6B02G021600.1.cds1, TraesCS6B02G021641.1.cds1, TraesCS6B02G045200.1.cds1, TraesCS6B02G114312.1.cds1, TraesCS6B02G127200.1.cds1, TraesCS6B02G127400.1.cds1, TraesCS6B02G127457.1.cds1, TraesCS6B02G127500.1.cds1, TraesCS6B02G127557.1.cds1, TraesCS6B02G129100.1, TraesCS6B02G129173.1.cds1, TraesCS6B02G129200.1.cds1, TraesCS6B02G341800.1.cds1, TraesCS6D02G018941.1, TraesCS6D02G047700.1.cds1, TraesCS6D02G076500.1, TraesCS6D02G083100.1.cds1, TraesCS6D02G083112.1.cds1, TraesCS6D02G083130.1.cds1, TraesCS6D02G083300.1.cds1, TraesCS6D02G083400.1.cds1, TraesCS6D02G089400.1.cds1, TraesCS6D02G089500.1, TraesCS6D02G089608.1.cds1, TraesCS6D02G290900.1.cds1, TraesCS7B02G469500.1.cds1, TraesCS7D02G231400.1.cds1, TraesCS7D02G487500.1.cds1, TraesCSU02G089563.1.cds1, TraesCSU02G089700.1.cds1, TraesCSU02G089705.1.cds1, TraesCSU02G090200.1.cds1
Poaceae	Zea mays	9	Zm00001eb065260_P001, Zm00001eb114490_P001 ... Zm00001eb114520_P001, Zm00001eb114600_P001, Zm00001eb114660_P001, Zm00001eb114690_P001, Zm00001eb301710_P001, Zm00001eb345130_P002, Zm00001eb345170_P001
Poaceae	Zoysia japonica	5	nbis-gene-34357, nbis-gene-43947, nbis-gene-49110 ... nbis-gene-7954, nbis-gene-7966
Poaceae	Zoysia macrostachya	7	Zma_g15222, Zma_g15496, Zma_g19491, Zma_g19493, Zma_g19497 ... Zma_g19498, Zma_g21114
Posidoniaceae	Posidonia oceanica	4	gene.Posoc02g30250, gene.Posoc02g34610, gene.Posoc07g00710 ... gene.Posoc07g00950
Salicaceae	Populus euphratica	1	populus_peu19919
Zosteraceae	Zostera marina	4	Zosma02g14330.v3.1, Zosma04g09020.v3.1, Zosma05g28260.v3.1 ... Zosma06g26890.v3.1