Basic Information
Locus ID:
AH04.2038
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 40597466 | 40606891 | - | AH04.2038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 130,848.41 Da | 36.52 | 89.09 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 8 | 129 | 1.56228E-17 | IPR038005 |
| Pfam | PF18052 | Rx N-terminal domain | 11 | 88 | 1.0E-15 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 173 | 393 | 1.3E-37 | IPR002182 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 858 | 1092 | 1.4E-28 | IPR001245 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 168 | 425 | 2.0E-55 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 838 | 1092 | 5.13E-53 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 504 | 680 | 7.82E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 930 | 1108 | 4.5E-30 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 10 | 134 | 3.3E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 484 | 684 | 1.5E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 157 | 318 | 3.7E-31 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 325 | 415 | 4.0E-10 | IPR042197 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 834 | 928 | 8.5E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 855 | 1100 | 25.898447 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 861 | 883 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 561 | 577 | 1.4E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 360 | 374 | 1.4E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 263 | 277 | 1.4E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 191 | 206 | 1.4E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 797 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 759 | - | - |
| Coils | Coil | Coil | 37 | 57 | - | - |
| Coils | Coil | Coil | 113 | 133 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 8.58E-61 |
| RefSeq | XP_051179986.1 | disease resistance protein RGA5-like isoform X3 [Lolium perenne] | 4.2E-176 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 1.91E-135 | |
| TrEMBL | A0A0A9FI80 | NB-ARC domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 4.85E-278 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for AH04.2038.