HalophFGD

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Basic Information
Locus ID: AH04.1940
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH04 39012402 39015668 + AH04.1940
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.61 26,620.45 Da 77.25 83.98 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 53 72 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 21 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 79 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039849183.1 uncharacterized protein LOC120708137 [Panicum virgatum] 3.73E-8
TrEMBL A0A3L6QZC8 Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM08G26260 PE=4 SV=1 8.44E-7
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 28 AH02.1637, AH02.3407, AH04.1021, AH04.1940, AH06.1327 ...
AH06.1908, AH06.2307, AH08.1711, AH08.795, BH02.2325, BH04.1838, BH04.2023, BH04.2346, BH04.82, BH05.2507, BH05.3727, BH09.185, BH09.477, BH09.479, CH02.1733, CH03.4794, CH04.1028, CH04.1436, CH04.44, CH05.3459, CH06.1596, CH09.2360, CH09.521
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.