halophFGD

Basic Information

Locus ID: AH04.1917

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Jacalin-like lectin domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH04	38648102	38670240	-	AH04.1917

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.48	62,503.30 Da	33.06	84.60	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd09612	Jacalin	334	461	2.7627E-41	IPR033734
Pfam	PF00069	Protein kinase domain	40	304	2.7E-50	IPR000719
Pfam	PF01419	Jacalin-like lectin domain	349	462	1.7E-22	IPR001229
SUPERFAMILY	SSF51101	Mannose-binding lectins	323	462	2.49E-43	IPR036404
SUPERFAMILY	SSF51101	Mannose-binding lectins	476	539	8.37E-11	IPR036404
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	24	307	7.82E-71	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	17	106	5.3E-21	-
Gene3D	G3DSA:2.100.10.30	-	322	463	1.6E-48	IPR036404
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	128	321	1.4E-52	-
Gene3D	G3DSA:2.100.10.30	-	475	554	1.5E-8	IPR036404
SMART	SM00220	serkin_6	37	304	9.1E-39	IPR000719
SMART	SM00915	Jacalin_2	341	464	1.6E-13	IPR001229
ProSiteProfiles	PS51752	Jacalin-type lectin domain profile.	323	464	37.111435	IPR001229
ProSiteProfiles	PS50011	Protein kinase domain profile.	37	307	37.884079	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	169	181	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	43	65	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0030246 (carbohydrate binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G21400.2	-	3.22E-49
RefSeq	XP_034568326.1	phytosulfokine receptor 1-like isoform X3 [Setaria viridis]	1.18E-257
Swiss-Prot	O65405	Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2	1.28E-47
TrEMBL	A0A1Z5RJB0	Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3005G182500 PE=4 SV=1	2.86E-262

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	16	AH02.601, AH04.1917, AH04.2063, AH04.984, AH04.986, BH04.535 ... BH04.1946, BH04.1947, BH04.904, BH04.934, CH03.3, CH04.1408, CH04.1624, CH04.2111, CH04.2290, CH04.2291
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_5AG0396410, gene-QOZ80_5BG0442950 ... gene-QOZ80_9AG0683790, gene-QOZ80_9AG0685340, gene-QOZ80_9BG0695800, gene-QOZ80_9BG0711440
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0008320.1, HORVU.MOREX.r3.2HG0098680.2 ... HORVU.MOREX.r3.2HG0098670.1.CDS1, HORVU.MOREX.r3.2HG0208840.1, HORVU.MOREX.r3.5HG0420370.1
Poaceae	Lolium multiflorum	16	gene-QYE76_003210, gene-QYE76_007483, gene-QYE76_007487 ... gene-QYE76_007511, gene-QYE76_007922, gene-QYE76_009318, gene-QYE76_009320, gene-QYE76_019664, gene-QYE76_019666, gene-QYE76_019668, gene-QYE76_019669, gene-QYE76_036521, gene-QYE76_036532, gene-QYE76_036739, gene-QYE76_040477, gene-QYE76_056771
Poaceae	Oryza coarctata	4	Oco09G005010, Oco21G003120, Oco22G003930, Oco22G003940
Poaceae	Oryza sativa	9	LOC_Os04g30030.1, LOC_Os04g30040.2, LOC_Os11g10640.1 ... LOC_Os11g10710.1, LOC_Os11g17380.1, LOC_Os11g39420.1, LOC_Os11g39450.1, LOC_Os11g39490.1, LOC_Os11g39530.1
Poaceae	Paspalum vaginatum	19	gene-BS78_05G059300, gene-BS78_05G121900, gene-BS78_K001200 ... gene-BS78_05G125100, gene-BS78_05G188700, gene-BS78_05G205700, gene-BS78_05G205900, gene-BS78_06G012700, gene-BS78_06G018400, gene-BS78_06G226600, gene-BS78_07G159200, gene-BS78_08G008700, gene-BS78_08G073500, gene-BS78_08G093200, gene-BS78_08G105000, gene-BS78_09G057500, gene-BS78_K312800, gene-BS78_K312900, gene-BS78_K313000
Poaceae	Puccinellia tenuiflora	14	Pt_Chr0106583, Pt_Chr0106605, Pt_Chr0202873, Pt_Chr0205823 ... Pt_Chr0207584, Pt_Chr0500272, Pt_Chr0500273, Pt_Chr0500275, Pt_Chr0702007, Pt_Chr0702066, Pt_Chr0702067, Pt_Chr0704769, Pt_Ctg00314, Pt_Ctg00315
Poaceae	Sporobolus alterniflorus	2	Chr26G000510, Chr27G002390
Poaceae	Thinopyrum elongatum	36	Tel1E01G111500, Tel1E01G154200, Tel2E01G023100 ... Tel2E01G023200, Tel2E01G070500, Tel2E01G070600, Tel2E01G070700, Tel2E01G070900, Tel2E01G071200, Tel2E01G071500, Tel2E01G072100, Tel2E01G073300, Tel2E01G963200, Tel2E01G963300, Tel3E01G001000, Tel3E01G020800, Tel3E01G020900, Tel3E01G886000, Tel3E01G886100, Tel5E01G016400, Tel5E01G651000, Tel5E01G680100, Tel5E01G891100, Tel6E01G109400, Tel6E01G109900, Tel6E01G112800, Tel6E01G113000, Tel6E01G113200, Tel6E01G739900, Tel7E01G002300, Tel7E01G807200, Tel7E01G807300, Tel7E01G807400, Tel7E01G825700, Tel7E01G856200, Tel7E01G858000
Poaceae	Triticum dicoccoides	37	gene_TRIDC1AG000060, gene_TRIDC1AG010440 ... gene_TRIDC1BG013170, gene_TRIDC1BG013210, gene_TRIDC1BG056560, gene_TRIDC1BG070910, gene_TRIDC2AG002440, gene_TRIDC2AG002460, gene_TRIDC2BG002130, gene_TRIDC2BG002660, gene_TRIDC2BG002670, gene_TRIDC2BG002680, gene_TRIDC2BG002720, gene_TRIDC2BG002770, gene_TRIDC2BG002880, gene_TRIDC2BG002890, gene_TRIDC2BG081640, gene_TRIDC2BG085800, gene_TRIDC3BG000040, gene_TRIDC4AG003690, gene_TRIDC4AG072350, gene_TRIDC4BG057810, gene_TRIDC5AG001080, gene_TRIDC5AG059860, gene_TRIDC5AG062460, gene_TRIDC5BG001040, gene_TRIDC5BG001070, gene_TRIDC5BG001150, gene_TRIDC5BG009700, gene_TRIDC6BG000050, gene_TRIDC6BG007380, gene_TRIDC7BG001810, gene_TRIDC7BG061610, gene_TRIDC7BG064400, gene_TRIDC7BG067780, gene_TRIDC7BG070220, gene_TRIDC7BG070340
Poaceae	Triticum aestivum	65	TraesCS1B02G093800.1, TraesCS1B02G348800.1 ... TraesCS1B02G451600.1, TraesCS1B02G451700.1, TraesCS1D02G077800.1, TraesCS1D02G271500.1, TraesCS2A02G023700.1, TraesCS2A02G023800.1, TraesCS2A02G023900.1, TraesCS2A02G024800.2, TraesCS2A02G024900.1, TraesCS2A02G039100.1, TraesCS2A02G465900.1, TraesCS2B02G026800.1, TraesCS2B02G027000.1, TraesCS2B02G033800.1, TraesCS2B02G034000.1, TraesCS2B02G034200.2, TraesCS2B02G034300.1, TraesCS2B02G034600.2, TraesCS2B02G035300.1, TraesCS2B02G036500.1, TraesCS2B02G036600.1, TraesCS2B02G036800.1, TraesCS2B02G552500.1, TraesCS2B02G576600.2, TraesCS2D02G019600.2, TraesCS2D02G024700.1, TraesCS2D02G024900.1, TraesCS2D02G025000.1, TraesCS2D02G025400.2, TraesCS2D02G026500.1, TraesCS2D02G057700.1, TraesCS2D02G068800.1, TraesCS3B02G005100.1, TraesCS3D02G439500.2, TraesCS4A02G026600.1, TraesCS4A02G484000.1, TraesCS4B02G301100.1, TraesCS4B02G343100.1, TraesCS5A02G413900.1, TraesCS5A02G433600.1, TraesCS5D02G005500.1, TraesCS5D02G017400.1, TraesCS5D02G422600.1, TraesCS5D02G502300.1, TraesCS5D02G539100.3, TraesCS6A02G041100.1, TraesCS6A02G041200.1, TraesCS6B02G004100.1, TraesCS6B02G008300.1, TraesCS6B02G044800.1, TraesCS6B02G056700.1, TraesCS6B02G057200.1, TraesCS6B02G057500.1, TraesCS6B02G057600.1, TraesCS7B02G407000.1, TraesCS7B02G445400.2, TraesCS7B02G446400.1, TraesCS7D02G000700.1, TraesCS7D02G487900.1, TraesCS7D02G503700.2, TraesCSU02G008100.1, TraesCSU02G008200.1, TraesCSU02G009400.1
Poaceae	Zea mays	1	Zm00001eb167140_P001
Poaceae	Zoysia japonica	3	nbis-gene-32046, nbis-gene-49063, nbis-gene-49776
Poaceae	Zoysia macrostachya	3	Zma_g13065, Zma_g13067, Zma_g28006