Basic Information
Locus ID:
AH04.1686
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 34329698 | 34333327 | + | AH04.1686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 47,019.10 Da | 42.42 | 57.90 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 235 | 318 | 2.0E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 433 | - | - |
| Coils | Coil | Coil | 250 | 280 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 2.47E-38 |
| RefSeq | XP_034568386.1 | protein WVD2-like 4 isoform X1 [Setaria viridis] | 3.04E-174 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 2.41E-37 | |
| TrEMBL | A0A1E5WGD9 | Protein WVD2-like 4 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002520 PE=3 SV=1 | 1.15E-174 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology