Basic Information
Locus ID:
AH04.1456
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 30035141 | 30036247 | - | AH04.1456 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 39,349.69 Da | 68.45 | 74.59 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 313 | 354 | 1.09751E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 312 | 360 | 2.47E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 292 | 359 | 3.9E-8 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 313 | 354 | 8.889546 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 88 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021317765.1 | uncharacterized protein LOC8064800 [Sorghum bicolor] | 2.69E-84 |
| TrEMBL | A0A3L6PKT5 | RING-type domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM18G08670 PE=4 SV=1 | 9.13E-121 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology