Basic Information
Locus ID:
AH04.1262
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Transferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 25593083 | 25601044 | - | AH04.1262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 143,484.91 Da | 46.23 | 79.00 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02458 | Transferase family | 59 | 346 | 2.7E-30 | IPR003480 |
| Gene3D | G3DSA:3.30.559.10 | - | 2 | 212 | 6.8E-34 | IPR023213 |
| Gene3D | G3DSA:3.30.559.10 | - | 217 | 424 | 7.4E-21 | IPR023213 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1069 | 1098 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 615 | 647 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17540.1 | HXXXD-type acyl-transferase family protein. | 1.31E-65 |
| RefSeq | XP_025828635.1 | acyl transferase 1-like [Panicum hallii] | 9.61E-183 |
| Q7G4G7 | Acyl transferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AT1 PE=2 SV=1 | 9.2E-99 | |
| TrEMBL | A0A2S3IEQ1 | Transferase OS=Panicum hallii OX=206008 GN=PAHAL_8G089300 PE=3 SV=1 | 2.17E-181 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 4 | Ftri18G33038, Ftri6G26243, Ftri6G34149, FtriNA26240 |
| Brassicaceae | Brassica nigra | 3 | BniB02g044040.2N, BniB05g046390.2N, BniB07g028240.2N |
| Plantaginaceae | Plantago ovata | 2 | Pov_00029076, Pov_00039561 |
| Poaceae | Echinochloa crus-galli | 7 | AH01.168, AH01.4944, AH04.1262, AH05.424, AH07.1449 ... |
| Poaceae | Eleusine coracana subsp. coracana | 85 | gene-QOZ80_1AG0019300, gene-QOZ80_1AG0021820 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_002090, gene-QYE76_004107, gene-QYE76_010998 ... |
| Poaceae | Oryza coarctata | 2 | Oco06G010700, Oco21G004780 |
| Poaceae | Sporobolus alterniflorus | 17 | Chr01G029280, Chr04G018110, Chr04G029980, Chr05G019600 ... |
| Poaceae | Zoysia japonica | 66 | nbis-gene-12256, nbis-gene-12257, nbis-gene-1525 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3359 |