Basic Information
Locus ID:
AH04.1247
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 24918298 | 24919503 | - | AH04.1247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 42,388.86 Da | 58.88 | 96.48 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 123 | 396 | 3.1E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 119 | 397 | 2.43E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 213 | 401 | 8.8E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 212 | 1.1E-15 | - |
| SMART | SM00220 | serkin_6 | 123 | 396 | 4.2E-76 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 396 | 41.95467 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 245 | 257 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 129 | 152 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 4.74E-43 |
| RefSeq | XP_025828713.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 7.83E-141 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 7.4E-56 | |
| TrEMBL | A0A2T7CND8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G148700 PE=3 SV=1 | 1.08E-140 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0140s00005.v1.0 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.2037, AH03.435, AH04.1243, AH04.1246, AH04.1247 ... |
| Poaceae | Oryza coarctata | 1 | Oco02G013250 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g39350.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G141800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G007020, Chr17G006410 |
| Poaceae | Zea mays | 1 | Zm00001eb169760_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38582, nbis-gene-38583 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18813 |