Basic Information
Locus ID:
AH04.1243
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 24812598 | 24813825 | + | AH04.1243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 41,786.09 Da | 53.06 | 98.71 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 128 | 391 | 7.9E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 126 | 392 | 4.59E-63 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 102 | 175 | 2.5E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 396 | 1.7E-54 | - |
| SMART | SM00220 | serkin_6 | 128 | 391 | 1.0E-70 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 128 | 391 | 33.997231 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 234 | 246 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 134 | 157 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 2.67E-36 |
| RefSeq | XP_025828713.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 5.41E-130 |
| A2XUW1 | Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-2 PE=3 SV=1 | 1.19E-38 | |
| TrEMBL | A0A4U6TIF6 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G126300v2 PE=3 SV=1 | 5.49E-132 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0140s00005.v1.0 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.2037, AH03.435, AH04.1243, AH04.1246, AH04.1247 ... |
| Poaceae | Oryza coarctata | 1 | Oco02G013250 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g39350.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G141800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G007020, Chr17G006410 |
| Poaceae | Zea mays | 1 | Zm00001eb169760_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38582, nbis-gene-38583 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18813 |