Basic Information
Locus ID:
AH04.119
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cytidylyltransferase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 994448 | 1007820 | - | AH04.119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 78,779.36 Da | 45.58 | 84.64 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02174 | CCT | 260 | 401 | 2.90536E-77 | IPR041723 |
| CDD | cd02173 | ECT | 455 | 605 | 2.55088E-81 | - |
| Pfam | PF01467 | Cytidylyltransferase-like | 458 | 550 | 2.3E-15 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 260 | 388 | 7.4E-27 | IPR004821 |
| Pfam | PF03357 | Snf7 | 27 | 161 | 1.5E-29 | IPR005024 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 455 | 590 | 3.22E-24 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 258 | 391 | 3.22E-28 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 429 | 643 | 1.1E-56 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 242 | 420 | 1.5E-56 | IPR014729 |
| Gene3D | G3DSA:1.10.287.1060 | - | 8 | 97 | 5.1E-20 | - |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 258 | 322 | 1.9E-21 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 456 | 523 | 1.1E-16 | IPR004821 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 428 | - | - |
| Coils | Coil | Coil | 118 | 148 | - | - |
| Coils | Coil | Coil | 25 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 5.84E-222 |
| RefSeq | XP_004977412.1 | ethanolamine-phosphate cytidylyltransferase [Setaria italica] | 2.69E-276 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 5.6E-221 | |
| TrEMBL | K3Y7J3 | ethanolamine-phosphate cytidylyltransferase OS=Setaria italica OX=4555 GN=101783308 PE=3 SV=1 | 6.07E-275 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology