Basic Information
Locus ID:
AH04.1107
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
POT family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 18497473 | 18503996 | - | AH04.1107 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 128,897.05 Da | 50.45 | 89.54 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00854 | POT family | 120 | 268 | 2.5E-21 | IPR000109 |
| Pfam | PF10536 | Plant mobile domain | 392 | 711 | 1.6E-27 | IPR019557 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 77 | 277 | 8.2E-37 | IPR036259 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 915 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 905 | - | - |
| Coils | Coil | Coil | 1039 | 1059 | - | - |
| Coils | Coil | Coil | 1095 | 1122 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62200.1 | Major facilitator superfamily protein. | 3.98E-29 |
| RefSeq | XP_004979163.1 | protein NRT1/ PTR FAMILY 4.5 [Setaria italica] | 2.42E-132 |
| Q93Z20 | Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1 | 3.93E-28 | |
| TrEMBL | B8BFQ9 | PMD domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32741 PE=4 SV=1 | 8.48E-223 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||