Basic Information
Locus ID:
AH04.1006
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
leucine-rich repeat receptor-like protein kinase At2g33170
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 15788198 | 15794729 | - | AH04.1006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 196,801.83 Da | 56.34 | 92.48 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 618 | 832 | 7.5E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 454 | 513 | 1.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 286 | 345 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 55 | 114 | 7.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 6 | 245 | 1.87E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 285 | 542 | 1.39E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 597 | 854 | 4.99E-65 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 249 | 549 | 1.8E-78 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 248 | 3.4E-65 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 597 | 696 | 5.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 697 | 874 | 2.3E-45 | - |
| SMART | SM00369 | LRR_typ_2 | 125 | 149 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 404 | 429 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 53 | 76 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 356 | 380 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 332 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 616 | 878 | 1.5E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 477 | 501 | 22.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 479 | 502 | 7.203709 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 616 | 878 | 35.862919 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 79 | 101 | 7.21141 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 622 | 644 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1044 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1562 | 1585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 926 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1446 | 1470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1446 | 1494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1558 | 1585 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 6.71E-75 |
| RefSeq | XP_012703877.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Setaria italica] | 9.78E-194 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 6.59E-74 | |
| TrEMBL | K3ZH38 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101782386 PE=3 SV=1 | 2.21E-192 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||