Basic Information
Locus ID:
AH03.97
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box protein At1g67390
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 1027606 | 1029986 | + | AH03.97 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 59,970.84 Da | 51.05 | 98.12 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 461 | 498 | 2.7E-6 | IPR006566 |
| Pfam | PF00646 | F-box domain | 67 | 99 | 9.0E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 203 | 340 | 7.46E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 113 | 1.57E-10 | IPR036047 |
| SMART | SM00579 | 9598neu4hmm | 459 | 527 | 0.0082 | IPR006566 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 64 | 100 | 8.967582 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55660.2 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 4.48E-9 |
| RefSeq | XP_039793267.1 | FBD-associated F-box protein At3g49020-like isoform X1 [Panicum virgatum] | 6.36E-151 |
| Q1PFK0 | F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 PE=2 SV=1 | 4.43E-8 | |
| TrEMBL | A0A8T0VYM9 | FBD domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG432416 PE=4 SV=1 | 7.72E-150 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology