Basic Information
Locus ID:
AH03.957
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 12193601 | 12203398 | - | AH03.957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 133,594.69 Da | 58.65 | 67.91 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 167 | 262 | 7.78712E-47 | - |
| CDD | cd13999 | STKc_MAP3K-like | 940 | 1197 | 5.7078E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 936 | 1196 | 1.6E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 180 | 264 | 3.4E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 926 | 1194 | 2.43E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 179 | 265 | 6.54E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 182 | 265 | 1.0E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1022 | 1211 | 2.6E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 927 | 1021 | 4.4E-26 | - |
| SMART | SM00220 | serkin_6 | 934 | 1203 | 1.2E-60 | IPR000719 |
| SMART | SM00666 | PB1_new | 178 | 265 | 1.0E-32 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 934 | 1200 | 41.827465 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 940 | 965 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1059 | 1071 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1124 | 1146 | 1.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1168 | 1190 | 1.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1016 | 1029 | 1.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1053 | 1071 | 1.5E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 640 | 665 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 665 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 446 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 3.63E-243 |
| RefSeq | XP_034582258.1 | serine/threonine-protein kinase STE20-like [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 3.51E-242 | |
| TrEMBL | A0A4U6VSS7 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G124200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology