Basic Information
Locus ID:
AH03.92
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box FBD LRR-repeat protein At4g03220
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 992470 | 995295 | + | AH03.92 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 57,156.27 Da | 49.39 | 100.23 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 29 | 63 | 3.5E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 172 | 477 | 2.43E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 78 | 2.88E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 14 | 65 | 2.8E-5 | - |
| SMART | SM00256 | fbox_2 | 32 | 72 | 0.0099 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 26 | 62 | 8.649649 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03220.1 | Protein with RNI-like/FBD-like domains. | 1.59E-11 |
| RefSeq | XP_014660226.1 | putative F-box/FBD/LRR-repeat protein At4g03220 [Setaria italica] | 1.78E-241 |
| Q9ZR09 | Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis thaliana OX=3702 GN=At4g03220 PE=4 SV=1 | 1.58E-10 | |
| TrEMBL | A0A4U6VYK9 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G014600v2 PE=4 SV=1 | 5.41E-242 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology