Basic Information
Locus ID:
AH03.784
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 9376887 | 9381478 | + | AH03.784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 79,959.28 Da | 40.56 | 82.17 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 299 | 331 | 1.37852E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 413 | 677 | 5.9E-41 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 25 | 80 | 4.1E-9 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 683 | 4.45E-67 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 299 | 335 | 3.59E-7 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 240 | 348 | 1.2E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 485 | 3.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 695 | 2.7E-46 | - |
| SMART | SM00220 | serkin_6 | 410 | 680 | 5.9E-29 | IPR000719 |
| SMART | SM00179 | egfca_6 | 299 | 343 | 1.7E-7 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 680 | 33.135056 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 299 | 336 | 8.817942 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 299 | 324 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 416 | 438 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 315 | 326 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 532 | 544 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 1.59E-111 |
| RefSeq | XP_039805522.1 | wall-associated receptor kinase 2-like [Panicum virgatum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 1.54E-110 | |
| TrEMBL | A0A8T0W6R0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG226300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology