Basic Information
Locus ID:
AH03.726
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 8474729 | 8480663 | - | AH03.726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 112,324.83 Da | 33.05 | 88.64 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 703 | 967 | 9.42055E-98 | - |
| Pfam | PF11721 | Malectin domain | 429 | 616 | 3.3E-43 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 701 | 966 | 3.3E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 96 | 400 | 2.35E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 967 | 3.96E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 982 | 2.0E-58 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 426 | 621 | 1.2E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 405 | 9.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 277 | 5.5E-51 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 772 | 2.8E-37 | - |
| SMART | SM00220 | serkin_6 | 697 | 967 | 2.7E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 973 | 37.884079 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | 6.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 817 | 829 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1011 | 1033 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1011 | 1026 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 1.28E-240 |
| RefSeq | XP_004955905.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X2 [Setaria italica] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 2.78E-239 | |
| TrEMBL | K3ZQB0 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101768194 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology