Basic Information
Locus ID:
AH03.670
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 7895813 | 7899547 | - | AH03.670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 55,653.21 Da | 56.72 | 87.80 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 50 | 7.6E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 122 | 357 | 1.73E-13 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 62 | 2.09E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 71 | 9.4E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 122 | 353 | 2.5E-9 | IPR032675 |
| SMART | SM00256 | fbox_2 | 17 | 56 | 7.8E-4 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 510 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 4.22E-11 |
| RefSeq | XP_021310175.1 | F-box/LRR-repeat protein 25-like isoform X2 [Sorghum bicolor] | 3.47E-129 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 4.14E-10 | |
| TrEMBL | A0A835KK30 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_015756 PE=4 SV=1 | 9.82E-158 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology