Basic Information
Locus ID:
AH03.669
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 7884813 | 7886806 | - | AH03.669 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 43,391.47 Da | 44.42 | 93.91 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 57 | 1.6E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 74 | 1.26E-12 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 112 | 316 | 6.12E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 97 | 360 | 7.3E-12 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 64 | 1.2E-7 | - |
| SMART | SM00256 | fbox_2 | 22 | 61 | 3.8E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 52 | 9.523964 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58860.1 | F-box/RNI-like superfamily protein. | 1.16E-16 |
| RefSeq | XP_025804601.1 | MEIOTIC F-BOX protein MOF-like isoform X2 [Panicum hallii] | 1.27E-174 |
| Q9LXR6 | Putative F-box protein At3g58860 OS=Arabidopsis thaliana OX=3702 GN=At3g58860 PE=4 SV=1 | 1.15E-15 | |
| TrEMBL | A0A2T8KND8 | F-box domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G084200 PE=4 SV=1 | 2.87E-173 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology