Basic Information
Locus ID:
AH03.525
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 5933481 | 5937422 | - | AH03.525 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.52 | 64,802.03 Da | 38.07 | 93.49 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 413 | 526 | 2.1E-6 | IPR013187 |
| Pfam | PF00646 | F-box domain | 219 | 254 | 5.1E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 216 | 267 | 1.83E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 219 | 255 | 4.3E-7 | - |
| SMART | SM00256 | fbox_2 | 219 | 259 | 8.9E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 312 | 541 | 6.9E-16 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 213 | 259 | 8.649649 | IPR001810 |
| Coils | Coil | Coil | 80 | 107 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06240.1 | F-box family protein. | 2.52E-8 |
| RefSeq | XP_002461646.1 | F-box/kelch-repeat protein At4g19930 [Sorghum bicolor] | 3.36E-128 |
| Q8GXC7 | F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 | 2.5E-7 | |
| TrEMBL | A0A3L6QTD8 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G05280 PE=4 SV=1 | 7.61E-165 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||