Basic Information
Locus ID:
AH03.522
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 5879936 | 5899688 | - | AH03.522 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 128,081.93 Da | 42.08 | 82.27 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 44 | 308 | 3.2E-42 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 342 | 433 | 5.1E-13 | IPR000535 |
| Pfam | PF00400 | WD domain, G-beta repeat | 890 | 925 | 4.0E-5 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 339 | 465 | 1.07E-19 | IPR008962 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 807 | 1075 | 3.26E-29 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 29 | 325 | 6.15E-66 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 463 | 608 | 2.51E-5 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 462 | 602 | 8.2E-9 | IPR013783 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 337 | 461 | 2.6E-25 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 336 | 2.7E-45 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 802 | 1093 | 3.3E-42 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 114 | 4.6E-23 | - |
| SMART | SM00320 | WD40_4 | 886 | 925 | 1.6E-7 | IPR001680 |
| SMART | SM00220 | serkin_6 | 42 | 309 | 1.3E-29 | IPR000719 |
| SMART | SM00320 | WD40_4 | 1025 | 1066 | 57.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 980 | 1022 | 59.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 794 | 834 | 30.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 893 | 925 | 11.711506 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 340 | 461 | 16.41717 | IPR000535 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 467 | 602 | 10.253609 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 324 | 32.711037 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 893 | 925 | 9.783781 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11300.2 | - | 3.38E-44 |
| RefSeq | XP_012703789.1 | uncharacterized protein LOC101779298 isoform X1 [Setaria italica] | 0 |
| Q9SXB4 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1 | 3.7E-43 | |
| TrEMBL | A0A368S9W7 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G201000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for AH03.522.