Basic Information
Locus ID:
AH03.435
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 4981662 | 4984686 | - | AH03.435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.24 | 53,691.17 Da | 80.94 | 77.28 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 342 | 494 | 1.6E-21 | IPR000719 |
| Pfam | PF01885 | RNA 2'-phosphotransferase, Tpt1 / KptA family | 221 | 282 | 8.6E-12 | IPR002745 |
| SUPERFAMILY | SSF56399 | ADP-ribosylation | 221 | 279 | 4.03E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 495 | 1.78E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.10.970 | - | 218 | 283 | 1.0E-11 | IPR042080 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 502 | 1.4E-31 | - |
| SMART | SM00220 | serkin_6 | 282 | 495 | 2.6E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 243 | 503 | 17.502851 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 404 | 416 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 68 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45330.2 | RNA 2'-phosphotransferase, Tpt1 / KptA family. | 4.31E-18 |
| RefSeq | XP_039778322.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 2.16E-62 |
| P83102 | Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster OX=7227 GN=Dyrk3 PE=1 SV=3 | 6.56E-14 | |
| TrEMBL | A0A1E5VAU2 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016710 PE=3 SV=1 | 2.67E-76 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0140s00005.v1.0 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.2037, AH03.435, AH04.1243, AH04.1246, AH04.1247 ... |
| Poaceae | Oryza coarctata | 1 | Oco02G013250 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g39350.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G141800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G007020, Chr17G006410 |
| Poaceae | Zea mays | 1 | Zm00001eb169760_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38582, nbis-gene-38583 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18813 |