Basic Information
Locus ID:
AH03.4115
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CIPK3
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 54702150 | 54705477 | - | AH03.4115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 50,815.90 Da | 28.66 | 85.99 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14663 | STKc_SnRK3 | 18 | 273 | 2.07859E-169 | - |
| CDD | cd12195 | CIPK_C | 318 | 433 | 5.49706E-50 | - |
| Pfam | PF00069 | Protein kinase domain | 19 | 274 | 1.9E-74 | IPR000719 |
| Pfam | PF03822 | NAF domain | 314 | 373 | 5.6E-20 | IPR004041 |
| SUPERFAMILY | SSF103243 | KA1-like | 345 | 432 | 2.09E-6 | IPR028375 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 312 | 9.04E-89 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 311 | 437 | 1.3E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 280 | 2.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 98 | 2.0E-32 | - |
| SMART | SM00220 | serkin_6 | 19 | 274 | 3.7E-106 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 312 | 336 | 12.30772 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 274 | 51.127636 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 138 | 150 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 48 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 4.54E-221 |
| RefSeq | XP_025803804.1 | CBL-interacting protein kinase 3-like [Panicum hallii] | 4.21E-301 |
| Q6X4A2 | CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK31 PE=1 SV=1 | 1.95E-260 | |
| TrEMBL | A0A2T7F0B6 | non-specific serine/threonine protein kinase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G481100 PE=3 SV=1 | 1.72E-302 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology