Basic Information
Locus ID:
AH03.4000
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 53564765 | 53567680 | - | AH03.4000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 62,079.57 Da | 39.01 | 94.64 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 280 | 543 | 7.95561E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 122 | 211 | 7.3E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 276 | 476 | 3.9E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 248 | 546 | 4.18E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 240 | 350 | 2.1E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 108 | 213 | 1.2E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 351 | 554 | 9.1E-52 | - |
| SMART | SM00220 | serkin_6 | 274 | 524 | 2.1E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 274 | 528 | 34.901806 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 104 | 214 | 17.375957 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 396 | 408 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23310.2 | - | 2.56E-108 |
| RefSeq | XP_025801805.1 | cysteine-rich receptor-like protein kinase 6 [Panicum hallii] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 6.27E-107 | |
| TrEMBL | A0A2T7F021 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G473000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.4000, BH03.4328, BH03.4330, CH07.183 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0580800, gene-QOZ80_7BG0611960 |
| Poaceae | Oryza coarctata | 1 | Oco13G015250 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g47230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G383200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G000630, Chr27G016880 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-150 |