Basic Information
Locus ID:
AH03.40
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 366660 | 371710 | + | AH03.40 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 97,619.28 Da | 51.01 | 71.13 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 53 | 147 | 4.25056E-39 | - |
| CDD | cd13999 | STKc_MAP3K-like | 607 | 863 | 1.06319E-106 | - |
| Pfam | PF00564 | PB1 domain | 68 | 147 | 9.4E-13 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 604 | 863 | 6.8E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 65 | 154 | 2.42E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 587 | 862 | 2.87E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 875 | 6.4E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 70 | 148 | 3.1E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 594 | 689 | 2.0E-23 | - |
| SMART | SM00220 | serkin_6 | 601 | 867 | 1.7E-53 | IPR000719 |
| SMART | SM00666 | PB1_new | 64 | 149 | 7.1E-21 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 601 | 867 | 41.643723 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 725 | 737 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 834 | 856 | 4.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 719 | 737 | 4.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 683 | 696 | 4.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 790 | 812 | 4.7E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 550 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 1.12E-132 |
| RefSeq | XP_034581860.1 | dual specificity protein kinase shkD-like [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 7.54E-129 | |
| TrEMBL | A0A4U6VY93 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G005000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology