Basic Information
Locus ID:
AH03.3862
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 52489783 | 52494533 | - | AH03.3862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 65,143.79 Da | 46.09 | 84.31 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 135 | 397 | 8.52724E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 136 | 398 | 4.9E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 426 | 580 | 3.1E-18 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 134 | 444 | 1.48E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 221 | 5.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 222 | 408 | 6.7E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 409 | 581 | 1.1E-16 | - |
| SMART | SM00220 | serkin_6 | 136 | 398 | 7.4E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 136 | 398 | 50.477474 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 8.794848 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 260 | 272 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 142 | 168 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 79 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_025800975.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Panicum hallii] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8KT77 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G465100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology