Basic Information
Locus ID:
AH03.3697
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 51333599 | 51337696 | - | AH03.3697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 112,244.92 Da | 51.39 | 74.06 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 738 | 995 | 6.34834E-106 | - |
| CDD | cd06410 | PB1_UP2 | 145 | 239 | 2.75799E-33 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 735 | 995 | 3.8E-64 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 157 | 224 | 3.2E-11 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 158 | 243 | 1.28E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 723 | 994 | 9.43E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 820 | 1006 | 1.4E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 725 | 819 | 4.0E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 160 | 239 | 7.9E-6 | - |
| SMART | SM00666 | PB1_new | 156 | 241 | 4.5E-16 | IPR000270 |
| SMART | SM00220 | serkin_6 | 732 | 998 | 4.5E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 732 | 999 | 41.544785 | IPR000719 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 966 | 988 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 814 | 827 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 851 | 869 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 922 | 944 | 1.1E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 663 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 4.32E-154 |
| RefSeq | XP_034581268.1 | uncharacterized protein LOC117844642 [Setaria viridis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 7.68E-133 | |
| TrEMBL | A0A4U6W2I2 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G400400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology