Basic Information
Locus ID:
AH03.3455
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 49353820 | 49364539 | + | AH03.3455 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 155,225.83 Da | 45.97 | 79.56 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04369 | Bromodomain | 1229 | 1293 | 2.76468E-9 | - |
| Pfam | PF13855 | Leucine rich repeat | 150 | 208 | 4.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 75 | 4.3E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 502 | 751 | 7.5E-27 | IPR001245 |
| Pfam | PF00439 | Bromodomain | 1202 | 1282 | 4.0E-6 | IPR001487 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 243 | 3.74E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 754 | 5.05E-49 | IPR011009 |
| SUPERFAMILY | SSF47370 | Bromodomain | 1181 | 1296 | 5.89E-13 | IPR036427 |
| Gene3D | G3DSA:1.20.920.10 | - | 1190 | 1306 | 1.9E-11 | IPR036427 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 774 | 3.6E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 260 | 7.8E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 454 | 570 | 1.7E-21 | - |
| SMART | SM00297 | bromo_6 | 1189 | 1298 | 1.3E-5 | IPR001487 |
| SMART | SM00220 | serkin_6 | 494 | 762 | 8.9E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 494 | 772 | 25.700571 | IPR000719 |
| ProSiteProfiles | PS50014 | Bromodomain profile. | 1229 | 1279 | 8.5244 | IPR001487 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 993 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1318 | 1434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1415 | 1434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1166 | 1188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1338 | 1352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1027 | 1063 | - | - |
| Coils | Coil | Coil | 901 | 928 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 6.54E-139 |
| RefSeq | XP_034579964.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Setaria viridis] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 6.32E-138 | |
| TrEMBL | A0A1E5VPQ0 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011872 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology