Basic Information
Locus ID:
AH03.3437
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 49207370 | 49210469 | + | AH03.3437 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 60,663.62 Da | 37.02 | 80.87 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 63 | 321 | 2.94271E-141 | - |
| CDD | cd15898 | EFh_PI-PLC | 370 | 502 | 5.90664E-15 | - |
| CDD | cd00051 | EFh | 441 | 503 | 1.70145E-16 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 64 | 322 | 2.5E-76 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 388 | 432 | 4.5E-5 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 440 | 503 | 1.1E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 350 | 528 | 2.78E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 334 | 1.75E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 330 | 1.8E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 331 | 505 | 2.1E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 149 | 5.8E-29 | - |
| SMART | SM00054 | efh_1 | 405 | 433 | 1.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 477 | 505 | 1.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 369 | 397 | 0.011 | IPR002048 |
| SMART | SM00054 | efh_1 | 441 | 469 | 0.092 | IPR002048 |
| SMART | SM00220 | serkin_6 | 64 | 322 | 2.6E-101 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 472 | 12.477041 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 473 | 508 | 14.569197 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 64 | 322 | 49.587032 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 401 | 436 | 8.766953 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 450 | 462 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 414 | 426 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 378 | 390 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 70 | 93 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 486 | 498 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 184 | 196 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 3.57E-285 |
| RefSeq | XP_039831285.1 | calcium-dependent protein kinase 20-like [Panicum virgatum] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0WCC8 | Calcium-dependent protein kinase 7 OS=Panicum virgatum OX=38727 GN=PVAP13_2KG498300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology