Basic Information
Locus ID:
AH03.3238
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 47243953 | 47249156 | + | AH03.3238 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 81,500.41 Da | 44.37 | 93.62 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 200 | 449 | 1.07558E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 196 | 445 | 4.7E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 184 | 449 | 5.4E-73 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 505 | 713 | 3.19E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 270 | 456 | 1.1E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 598 | 696 | 1.5E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 501 | 560 | 2.7E-9 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 16 | 86 | 3.5E-5 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 159 | 269 | 1.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 561 | 597 | 1.2E-5 | - |
| SMART | SM00220 | serkin_6 | 194 | 454 | 8.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 194 | 464 | 33.502541 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 299 | 311 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 3.03E-105 |
| RefSeq | XP_004957920.2 | L-type lectin-domain containing receptor kinase IX.1 [Setaria italica] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 4.33E-104 | |
| TrEMBL | A0A1E5V181 | Cysteine-rich receptor-like protein kinase 25 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020205 PE=4 SV=1 | 2.10000000027E-315 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3238, BH03.3419, BH03.3423, BH03.3425 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0570310, gene-QOZ80_7BG0602060 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139070.1 |
| Poaceae | Oryza coarctata | 2 | Oco13G009180, Oco14G009600 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G300500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304235 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005290, Chr27G011970 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G406000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028920, gene_TRIDC2AG028930 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217600.1, TraesCS2B02G243100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb106320_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-822 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6568 |