Basic Information
Locus ID:
AH03.3147
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Senescence regulator
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 46554329 | 46555036 | - | AH03.3147 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 24,449.35 Da | 64.90 | 71.96 | -0.37 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04630.1 | Protein of unknown function, DUF584. | 3.28E-7 |
| RefSeq | XP_004957841.1 | uncharacterized protein LOC101783175 [Setaria italica] | 4.89E-30 |
| TrEMBL | K4A386 | Uncharacterized protein OS=Setaria italica OX=4555 GN=101783175 PE=4 SV=1 | 1.11E-28 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH03.3147, CH03.3504 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g32810.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G291600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005710, Chr27G011590 |
| Poaceae | Zea mays | 1 | Zm00001eb322590_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38322, nbis-gene-900 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g5222, Zma_g6514 |