Basic Information
Locus ID:
AH03.3126
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 46346274 | 46351537 | + | AH03.3126 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 55,074.65 Da | 40.04 | 91.07 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 381 | 452 | 6.3E-21 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 32 | 363 | 4.3E-59 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 32 | 363 | 4.67E-76 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 375 | 487 | 1.5E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 31 | 369 | 5.5E-97 | - |
| SMART | SM00768 | X8_cls | 380 | 465 | 1.5E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 274 | 287 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 7.22E-181 |
| RefSeq | XP_014660268.1 | glucan endo-1,3-beta-glucosidase 1 [Setaria italica] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 6.94E-180 | |
| TrEMBL | K3ZS68 | X8 domain-containing protein OS=Setaria italica OX=4555 GN=106804114 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology