Basic Information
Locus ID:
AH03.3114
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 46233084 | 46238557 | + | AH03.3114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 63,008.51 Da | 45.82 | 84.09 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08311 | Mad3/BUB1 homology region 1 | 35 | 147 | 2.1E-21 | IPR013212 |
| Pfam | PF00069 | Protein kinase domain | 253 | 470 | 1.3E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 247 | 469 | 4.72E-32 | IPR011009 |
| Gene3D | G3DSA:1.25.40.430 | - | 29 | 185 | 3.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 248 | 550 | 2.1E-97 | - |
| SMART | SM00777 | mad3_bub1_i | 16 | 147 | 1.8E-8 | IPR013212 |
| SMART | SM00220 | serkin_6 | 250 | 521 | 4.9E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 250 | 553 | 18.87385 | IPR000719 |
| ProSiteProfiles | PS51489 | BUB1 N-terminal domain profile. | 24 | 186 | 38.423515 | IPR013212 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 371 | 383 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20635.1 | ATP binding;protein kinases;protein serine/threonine kinases. | 2.37E-188 |
| RefSeq | XP_034579070.1 | mitotic checkpoint serine/threonine-protein kinase BUB1 [Setaria viridis] | 0 |
| F4IVI0 | Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Arabidopsis thaliana OX=3702 GN=BUB1 PE=1 SV=1 | 2.28E-187 | |
| TrEMBL | A0A4U6W0G4 | Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Setaria viridis OX=4556 GN=SEVIR_2G338000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg19492 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25917 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah012059 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g205190 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11770, Sbi_jg46643 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20999 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00025049 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl79965, Sgl82398, Sgl82411 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018931, gene:ENSEOMG00000038970 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.9BG0014450 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30020070 |
| Apiaceae | Apium graveolens | 1 | Ag9G02199 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G012230 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103707190, gene-LOC113462720 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.1158.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G23441 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G20635.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10001957m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g33890.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g016490.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2654 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2741 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g14990 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g19530 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1809 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00008522 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb3G19393, Lb3G20298, Lb4G24268 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.3114, BH03.3296, CH03.3481 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0568650, gene-QOZ80_7BG0599960 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0142450.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_041123 |
| Poaceae | Oryza coarctata | 2 | Oco13G008270, Oco14G008730 |
| Poaceae | Oryza sativa | 2 | LOC_Os06g19420.1, LOC_Os07g32480.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G288800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0304162, Pt_Chr0405482 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G005860, Chr24G008240, Chr27G011450, Chr28G007560 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G419700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG030220, gene_TRIDC2BG033900 |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G226000.1, TraesCS2B02G249400.1 |
| Poaceae | Zea mays | 1 | Zm00001eb322380_P004 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38352 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5212 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.732, evm.TU.LG26.296 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g19910 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-11854, nbisL1-mrna-29738 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5376 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11117 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000006l.788 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-10309 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7155 |
| Salicaceae | Populus euphratica | 1 | populus_peu22507 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132618642 |
| Solanaceae | Solanum chilense | 1 | SOLCI003300700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107024434 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16787 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G1510 |
| Zosteraceae | Zostera marina | 1 | Zosma04g27030.v3.1 |