Basic Information
Locus ID:
AH03.2849
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 43601144 | 43601690 | - | AH03.2849 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 15,138.20 Da | 46.01 | 86.64 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 64 | 131 | 6.02E-16 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 48 | 131 | 1.7E-20 | IPR036890 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 122 | 143 | 5.3E-17 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 97 | 114 | 5.3E-17 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 79 | 96 | 5.3E-17 | IPR020575 |
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56000.1 | HEAT SHOCK PROTEIN 81.4. | 4.84E-22 |
| RefSeq | XP_019196322.1 | PREDICTED: heat shock protein 90-2-like [Ipomoea nil] | 2.6E-22 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 1.59E-22 | |
| TrEMBL | A0A0V0YQ30 | Heat shock protein 81-1 (Fragment) OS=Trichinella patagoniensis OX=990121 GN=HSP81-1 PE=3 SV=1 | 1.84E-22 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology