Basic Information
Locus ID:
AH03.2704
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Oxidoreductase-like protein, N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 42245802 | 42246188 | - | AH03.2704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 12,837.52 Da | 56.87 | 62.73 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF09791 | Oxidoreductase-like protein, N-terminal | 64 | 103 | 3.6E-15 | IPR019180 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 128 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G17280.1 | 5.28E-15 | |
| RefSeq | XP_039796101.1 | oxidoreductase-like domain-containing protein 1 [Panicum virgatum] | 1.16E-56 |
| TrEMBL | A0A8T0VMC0 | Oxidoreductase-like domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG447200 PE=4 SV=1 | 2.62E-55 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31187 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8749 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027669 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g129690 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14121, Sbi_jg51872 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg10024 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00025398 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl34911, Sgl49608 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027911 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0027450, CQ.Regalona.r1.6BG0028830 |
| Apiaceae | Apium graveolens | 1 | Ag9G00670 |
| Arecaceae | Cocos nucifera | 1 | COCNU_09G000550 |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G12603, Ftri1G01664 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G17280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10014934m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g26950.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g045650.2N, BniB05g022100.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g08450 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0304s00013.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g11190 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6997 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020839 |
| Poaceae | Echinochloa crus-galli | 2 | AH03.2704, CH03.3052 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0528500, gene-QOZ80_6BG0482520 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0498540.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006801 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g36120.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G252000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0700982 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G013990, Chr11G008310, Chr21G010550 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G507400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG047160, gene_TRIDC5BG051000 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G318900.1.cds1, TraesCS5B02G319400.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb319510_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35304 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32218 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG25.929 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc06g13240, gene.Posoc08g14440 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17051 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14489 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-11735, nbisL1-mrna-21069, nbisL1-mrna-22577 ... |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.528 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007438 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23052 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-3035 |
| Salicaceae | Populus euphratica | 1 | populus_peu23651 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132624826 |
| Solanaceae | Solanum chilense | 1 | SOLCI002378800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009166 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0091 |
| Zosteraceae | Zostera marina | 1 | Zosma01g31150.v3.1 |