Basic Information
Locus ID:
AH03.2573
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 41046642 | 41049732 | - | AH03.2573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 64,747.20 Da | 43.04 | 78.27 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 470 | 529 | 1.72549E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 84 | 347 | 1.81424E-116 | - |
| Pfam | PF13499 | EF-hand domain pair | 396 | 455 | 5.6E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 470 | 528 | 4.3E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 85 | 348 | 3.6E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 359 | 4.18E-76 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 377 | 550 | 3.46E-42 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 175 | 4.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 359 | 3.4E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 389 | 457 | 2.5E-47 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 366 | 528 | 2.5E-47 | - |
| SMART | SM00054 | efh_1 | 467 | 495 | 0.0018 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 11.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 503 | 531 | 1.3E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 85 | 348 | 7.9E-84 | IPR000719 |
| SMART | SM00054 | efh_1 | 395 | 423 | 0.067 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 8.487999 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 14.06708 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 85 | 348 | 44.654266 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 499 | 534 | 12.504936 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 14.122869 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 210 | 222 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 512 | 524 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 91 | 114 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 404 | 416 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 3.38E-185 |
| RefSeq | XP_004957332.1 | calcium-dependent protein kinase 22 [Setaria italica] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 9.16E-258 | |
| TrEMBL | K3ZS19 | Calcium-dependent protein kinase 24 OS=Setaria italica OX=4555 GN=101754008 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology