Basic Information
Locus ID:
AH03.2570
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Tyr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 41019232 | 41025287 | + | AH03.2570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 71,178.88 Da | 52.63 | 73.87 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 384 | 575 | 5.9E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 361 | 633 | 2.46E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 643 | 5.4E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 358 | 456 | 2.8E-25 | - |
| SMART | SM00219 | tyrkin_6 | 381 | 633 | 3.3E-14 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 637 | 28.83832 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 483 | 495 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 387 | 410 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 109 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59350.2 | Protein kinase superfamily protein. | 1.12E-166 |
| RefSeq | XP_025801821.1 | PTI1-like tyrosine-protein kinase 3 [Panicum hallii] | 5.49E-226 |
| B9DFG5 | PTI1-like tyrosine-protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=PTI13 PE=1 SV=1 | 4.76E-165 | |
| TrEMBL | A0A2T7EUL2 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G319100 PE=4 SV=1 | 1.52E-225 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for AH03.2570.