Basic Information
Locus ID:
AH03.2545
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 40772996 | 40779399 | + | AH03.2545 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 97,074.84 Da | 46.72 | 82.93 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 283 | 545 | 5.443E-86 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 278 | 546 | 1.8E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 260 | 548 | 9.17E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 256 | 347 | 3.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 348 | 565 | 2.9E-56 | - |
| SMART | SM00220 | serkin_6 | 277 | 549 | 1.9E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 277 | 559 | 37.827545 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 283 | 305 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 392 | 404 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 672 | 692 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 3.82E-172 |
| RefSeq | XP_012698792.1 | lysM domain receptor-like kinase 10 isoform X2 [Setaria italica] | 0 |
| D7UPN3 | LysM domain receptor-like kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RLK10 PE=2 SV=1 | 2.83E-269 | |
| TrEMBL | K3ZRH1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology