Basic Information
Locus ID:
AH03.250
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF1365)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 2974050 | 2976986 | - | AH03.250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 36,555.32 Da | 39.56 | 87.33 | -0.26 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30130.1 | 1.97E-102 | |
| RefSeq | XP_004955476.1 | uncharacterized protein LOC101765325 [Setaria italica] | 8.51E-219 |
| TrEMBL | K3ZVA2 | DUF1365 domain-containing protein OS=Setaria italica OX=4555 GN=101765325 PE=4 SV=1 | 1.93E-217 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20771 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22523 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah016269 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg50632 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2181 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019209 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl44919, Sgl45046, Sgl49682, Sgl49816 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009140, gene:ENSEOMG00000031476 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0009510, CQ.Regalona.r1.8BG0010330 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30069140, pistato.v30069540 |
| Apiaceae | Apium graveolens | 3 | Ag6G01124, Ag8G00772, AgUnG00140 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G020350 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC113462627 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.3393.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri5G25191 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G30130.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10008271m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g25990.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g016270.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0268 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0378 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g03790 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0260s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g26460 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.109 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00022213, Pov_00038490 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G25167, Lb5G29317 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.250, BH03.327, CH03.396 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0555810, gene-QOZ80_7BG0586780 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0202270.1 |
| Poaceae | Oryza coarctata | 2 | Oco13G001580, Oco14G001670 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g05870.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G036300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0303542 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G001400, Chr28G001000 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G844600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG070310, gene_TRIDC2BG076020 |
| Poaceae | Triticum aestivum | 4 | TraesCS1A02G123800.1.cds1, TraesCS2A02G499600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb300160_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-51834 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5990 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG10.30 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g07720 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_16_RagTag.801 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24981 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12969 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19190 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000022l.84 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016209 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-81 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10326 |
| Salicaceae | Populus euphratica | 3 | populus_peu24348, populus_peu33580, populus_peu33581 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132609577, gene-LOC132609580 |
| Solanaceae | Solanum chilense | 1 | SOLCI003786000 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_10528 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1046 |
| Zosteraceae | Zostera marina | 1 | Zosma05g29950.v3.1 |