Basic Information
Locus ID:
AH03.2483
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 40285948 | 40291677 | + | AH03.2483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 130,088.18 Da | 49.05 | 75.06 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 614 | 955 | 8.60086E-96 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 619 | 946 | 5.7E-14 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 591 | 978 | 4.32E-58 | IPR036691 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 222 | 596 | 1.44E-21 | - |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 594 | 987 | 7.2E-100 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 148 | 423 | 4.9E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 455 | 593 | 4.4E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 291 | 330 | 130.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 612 | 961 | 3.5E-84 | IPR000300 |
| SMART | SM00320 | WD40_4 | 549 | 586 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 210 | 251 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 470 | 508 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 510 | 547 | 4.1 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1141 | 1181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1154 | 1168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 448 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05630.2 | Endonuclease/exonuclease/phosphatase family protein. Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightstimulated increase in cytosolic calcium ion. | 0 |
| RefSeq | XP_039834921.1 | type I inositol polyphosphate 5-phosphatase 13-like [Panicum virgatum] | 0 |
| Q9SYK4 | Type I inositol polyphosphate 5-phosphatase 13 OS=Arabidopsis thaliana OX=3702 GN=IP5P13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0W7L7 | IPPc domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG411746 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology