Basic Information
Locus ID:
AH03.2339
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 38778252 | 38782671 | + | AH03.2339 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 87,917.90 Da | 45.84 | 83.97 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01501 | Glycosyl transferase family 8 | 359 | 613 | 1.3E-64 | IPR002495 |
| Pfam | PF05617 | Prolamin-like | 723 | 785 | 3.3E-10 | IPR008502 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 390 | 606 | 1.15E-45 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 393 | 615 | 2.7E-31 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 715 | - | - |
| Coils | Coil | Coil | 321 | 341 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 7.74E-166 |
| RefSeq | XP_034582201.1 | probable galacturonosyltransferase 4 isoform X1 [Setaria viridis] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 7.45E-165 | |
| TrEMBL | A0A2T7ETR5 | Hexosyltransferase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G295700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology