Basic Information
Locus ID:
AH03.2279
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 38151938 | 38156145 | - | AH03.2279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 81,821.68 Da | 49.63 | 77.47 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 81 | 277 | 1.09258E-96 | - |
| Pfam | PF00183 | Hsp90 protein | 259 | 660 | 1.8E-144 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 95 | 254 | 4.3E-11 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 79 | 287 | 3.87E-57 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 330 | 576 | 7.28E-81 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 596 | 664 | 3.53E-15 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 501 | 575 | 4.0E-27 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 77 | 304 | 2.0E-82 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 576 | 673 | 2.4E-22 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 328 | 500 | 1.3E-71 | - |
| SMART | SM00387 | HKATPase_4 | 94 | 256 | 0.0047 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 56 | 671 | 2.1E-197 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 92 | 101 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 142 | 159 | 1.6E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 263 | 281 | 1.6E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 160 | 177 | 1.6E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 93 | 115 | 1.6E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 189 | 211 | 1.6E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 244 | 261 | 1.6E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 72 | 92 | 1.6E-56 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 69 | 696 | 23.671671 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 720 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_004957103.1 | heat shock protein 90-5, chloroplastic [Setaria italica] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | K3ZQW0 | HATPase_c domain-containing protein OS=Setaria italica OX=4555 GN=101763050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology