Basic Information
Locus ID:
AH03.220
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 2526757 | 2528172 | + | AH03.220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.36 | 50,875.88 Da | 51.37 | 103.21 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 57 | 95 | 9.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 43 | 104 | 2.22E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 211 | 366 | 2.55E-8 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 54 | 98 | 9.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 217 | 426 | 1.8E-7 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034579636.1 | uncharacterized protein LOC117843186 [Setaria viridis] | 7.95E-171 |
| TrEMBL | K3ZZM5 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G031400v2 PE=4 SV=1 | 1.18E-167 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||