Basic Information
Locus ID:
AH03.203
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 2382012 | 2383389 | - | AH03.203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.02 | 31,553.12 Da | 45.18 | 101.34 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 25 | 174 | 3.77E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 12 | 273 | 1.0E-5 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012699372.1 | F-box/LRR-repeat protein 13 [Setaria italica] | 1.87E-132 |
| TrEMBL | A0A368PWT9 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G029700v2 PE=4 SV=1 | 4.23E-131 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH03.203, CH03.323 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0629230.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_041302, gene-QYE76_041311 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G031700, gene-BS78_02G031800 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0404642, Pt_Chr0404705, Pt_Chr0604369 |
| Poaceae | Thinopyrum elongatum | 4 | Tel6E01G701900, Tel6E01G702100, Tel6E01G702600 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG057750, gene_TRIDC6BG067240 |
| Poaceae | Triticum aestivum | 7 | TraesCS6A02G389500.1, TraesCS6A02G390000.1 ... |