Basic Information
Locus ID:
AH03.1636
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 29780191 | 29784622 | - | AH03.1636 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 86,501.98 Da | 68.47 | 74.84 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 632 | 721 | 3.6E-22 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 285 | 396 | 1.6E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 793 | 2.56E-37 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 267 | 397 | 1.26E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 625 | 797 | 3.9E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 357 | 1.7E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 359 | 403 | 3.3E-5 | - |
| SMART | SM00220 | serkin_6 | 281 | 779 | 8.1E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 788 | 25.714706 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 634 | 646 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 287 | 309 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 193 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49270.1 | Protein kinase superfamily protein. | 4.67E-80 |
| RefSeq | XP_008652581.1 | proline-rich receptor-like protein kinase PERK7 [Zea mays] | 4.58E-130 |
| Q9XI96 | Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1 | 4.55E-79 | |
| TrEMBL | A0A804QAM8 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 1.04E-128 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH03.1636, BH03.1789, CH03.1953 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G157200, gene-BS78_02G157300 ... |