halophFGD

Basic Information

Locus ID: AH03.1577

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: F-box-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH03	28418619	28419779	+	AH03.1577

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.29	43,338.74 Da	45.43	82.88	-0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	5	42	1.8E-7	IPR001810
SUPERFAMILY	SSF81383	F-box domain	5	70	3.14E-12	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	1	47	2.0E-6	-
SMART	SM00256	fbox_2	6	47	3.5E-4	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_052166751.1	uncharacterized protein LOC127783602 [Oryza glaberrima]	6.73E-61
TrEMBL	A0A1E5WNH1	F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000047 PE=4 SV=1	7.81E-223

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	AH03.1577, CH03.1908
Poaceae	Paspalum vaginatum	1	gene-BS78_02G152400
Poaceae	Zoysia japonica	1	nbis-gene-55959
Poaceae	Zoysia macrostachya	1	Zma_g32376