Basic Information
Locus ID:
AH03.1552
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 27873074 | 27874387 | + | AH03.1552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 49,808.61 Da | 52.52 | 79.75 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 26 | 59 | 3.7E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 82 | 6.02E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 18 | 69 | 4.9E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 71 | 10.954661 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022680036.1 | uncharacterized protein LOC111256385 [Setaria italica] | 1.34E-222 |
| TrEMBL | A0A4U6VV45 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G181900v2 PE=4 SV=1 | 5.34E-224 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology