Basic Information
Locus ID:
AH03.1339
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 22059099 | 22063413 | - | AH03.1339 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.70 | 48,014.64 Da | 50.27 | 55.77 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 25 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039803998.1 | uncharacterized protein LOC120668141 [Panicum virgatum] | 1.36E-17 |
| TrEMBL | A0A0D3FTC0 | Transposase_23 domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 3.2E-47 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 23 | AH03.1339, AH04.1181, AH05.1634, AH05.2682, AH05.3161 ... |
| Poaceae | Oryza coarctata | 1 | Oco01G029890 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g25690.1 |