Basic Information
Locus ID:
AH03.132
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 1483182 | 1486105 | - | AH03.132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 45,128.95 Da | 53.33 | 89.42 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 48 | 1.8E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 64 | 5.89E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 43 | 6.3E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 112 | - | - |
| Coils | Coil | Coil | 84 | 121 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025819368.1 | uncharacterized protein LOC112895608 [Panicum hallii] | 5.38E-84 |
| TrEMBL | A0A8T0SIM9 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG206700 PE=4 SV=1 | 2.69E-98 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH03.132, CH03.202 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G201700 |