Basic Information
Locus ID:
AH03.131
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 1460745 | 1464554 | - | AH03.131 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 78,626.27 Da | 42.03 | 76.55 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 339 | 604 | 7.9E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 639 | 1.21E-58 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 76 | 270 | 1.2E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 417 | 611 | 9.0E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 416 | 2.6E-28 | - |
| SMART | SM00220 | serkin_6 | 336 | 606 | 3.1E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 615 | 30.294121 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 342 | 370 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 705 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 1.07E-60 |
| RefSeq | XP_034579179.1 | L-type lectin-domain containing receptor kinase IX.1-like [Setaria viridis] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 1.05E-59 | |
| TrEMBL | A0A4U6VND0 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G020100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.131, BH03.146, BH04.1794, CH03.209 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G015000, gene-BS78_08G090500 |